Information for 1-ATCATCGCTG (Motif 6)

C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
Reverse Opposite:
G T A C C G T A T C A G G T A C A T C G C G T A A C G T C A T G C G T A A G C T
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.724
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif183.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets56.4 +/- 22.5bp
Average Position of motif in Background48.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATCATCGCTG-----
AAAACATCGTTTTTAAG
 A C G T A C G T C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCGCTG
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C G T C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCATCGCTG
CTAATCGNT-
 C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATCATCGCTG-
-TAATCGATAA
 C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATCATCGCTG
GCTAAACGGT-
 A C G T C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATCATCGCTG-
-TAATCGATAA
 C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATCATCGCTG
-----NGCTN
 C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------ATCATCGCTG
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATCATCGCTG
AAATCACTGC--
 A C G T A C G T C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

PH0096.1_Lhx6_1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------ATCATCGCTG
TACATTAATTAACGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G T A C G T C A C G A T T A G C A C T G A G T C C G A T C A T G
C G A T T C G A G T A C T G C A G A C T G A C T T C G A C T G A A G C T A G C T C T G A C T G A A G T C C A T G A G T C G C A T A T G C