Information for 1-TAGGGTTGTTCAGAMA (Motif 2)

C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A
Reverse Opposite:
G A C T A C G T C G A T A G T C A C G T C A T G C G T A T G C A G T A C G T C A G C T A A G T C A G T C G T A C A C G T C G T A
p-value:1e-12
log p-value:-2.991e+01
Information Content per bp:1.718
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.0 +/- 22.3bp
Average Position of motif in Background47.1 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TAGGGTTGTTCAGAMA
------TGTCTAGACG
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TAGGGTTGTTCAGAMA--
---KGTTGCTAGGMAACA
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TAGGGTTGTTCAGAMA--
---AGATGKDGAGATAAG
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTTGTTCAGAMA
CAAAGGCGTGGCCAG---
 A C G T A C G T C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:TAGGGTTGTTCAGAMA
----CBTGTTTAYAWW
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A
A C G T A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TAGGGTTGTTCAGAMA
-AAGGKGRCGCAGGCA
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:TAGGGTTGTTCAGAMA-
-----NTGTTTAYATWW
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.47
Offset:4
Orientation:forward strand
Alignment:TAGGGTTGTTCAGAMA-----
----CAAATCCAGACATCACA
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:TAGGGTTGTTCAGAMA
-NNCGTTGCTATGGNN
 C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGTTGTTCAGAMA----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T C G A T C G T A C A T G C T A G T C A G C G A T A C G T A C T G A C G T G A C T G T A C C G T A A C T G C G T A G T C A C T G A A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A