Information for 8-ARGCTCTCRGMGT (Motif 9)

C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A G T C A G C T A T C G T C G A A C T G C G T A A C T G A G T C A G C T C G A T
p-value:1e-11
log p-value:-2.747e+01
Information Content per bp:1.828
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.9 +/- 22.8bp
Average Position of motif in Background46.3 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ARGCTCTCRGMGT
--GCTCCG-----
 C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ARGCTCTCRGMGT
-NGCTN-------
 C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ARGCTCTCRGMGT
AGCCACTCAAG--
 C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ARGCTCTCRGMGT---
-GGGTCAACGAGTTCA
 C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T A C G T A C G T A C G T
A C G T C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ARGCTCTCRGMGT------
NGAGGTCANNGAGTTCANNN
 A C G T C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ARGCTCTCRGMGT
CAAGCTT-------
 A C G T C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ARGCTCTCRGMGT
AASCACTCAA---
 C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-ARGCTCTCRGMGT-
ACCACTCTCGGTCAC
 A C G T C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ARGCTCTCRGMGT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-ARGCTCTCRGMGT-
AGTATTCTCGGTTGC
 A C G T C G T A C T G A A C T G A G T C A C G T A G T C A G C T A T G C C T G A A C T G G T C A A C T G A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C