Information for 11-AAATGAATTYTGGYCT (Motif 18)

C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
Reverse Opposite:
C T G A C A T G C T A G G T A C A T G C G T C A C T G A T C G A C G T A G A C T A C G T A G T C C G T A A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.754
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 20.2bp
Average Position of motif in Background55.5 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAATGAATTYTGGYCT
NNNNTGAATTCANNNC-
 A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAATGAATTYTGGYCT
TAATCAATTA------
 C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAATGAATTYTGGYCT
ACTATGAATGAATGAT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAATGAATTYTGGYCT
NNNTATTGAATTGNNN---
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAATGAATTYTGGYCT
HNRAATCAAT--------
 A C G T A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAATGAATTYTGGYCT
GATTAATTAATTT------
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAATGAATTYTGGYCT
--ATGAATATTC----
 C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAATGAATTYTGGYCT
-AATTATT--------
 C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAATGAATTYTGGYCT
NNTNTCATGAATGT------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAATGAATTYTGGYCT
AGAAATGACTTCCCT---
 A C G T A C G T C G T A C G T A C G T A A C G T C T A G G T C A C G T A A C G T A G C T A G C T C A G T A T C G A C T G G A T C G A T C A G C T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T A C G T