Information for 12-CGGBGGAGGRATA (Motif 13)

A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
Reverse Opposite:
C G A T C G T A A C G T A G C T A G T C A G T C A C G T A G T C A G T C T G C A A G T C A G T C A C T G
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 21.6bp
Average Position of motif in Background49.7 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGBGGAGGRATA
GGCGGGGGCGGGGG-
 A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGBGGAGGRATA
-GGGGGCGGGGC-
 A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGGBGGAGGRATA
-GGGGGGGG----
 A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGGBGGAGGRATA
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGBGGAGGRATA
TGGGGAAGGGCM-
 A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGBGGAGGRATA
GTGGGGGAGGGG--
 A C G T A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGGBGGAGGRATA
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGBGGAGGRATA-
---GGGCGGGAAGG
 A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGBGGAGGRATA
-BTKGGCGGGAAA
 A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

ZNF263/MA0528.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGBGGAGGRATA---------
-GGAGGAGGAGGGGGAGGAGGA
 A G T C A C T G A C T G A C G T A C T G A C T G C G T A A C T G A C T G C T G A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A