Information for 5-KGRRSGRSRAWGGKAG (Motif 8)

A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T G T C A A G T C A G T C C G A T A C G T A G C T A T G C A G T C A G T C T A C G A G T C A G C T A G T C G T C A
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.790
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.75%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 27.1bp
Average Position of motif in Background55.0 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG-
-----GGGAATTGTAGT
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG
-GGGGGGGGGGGGGGA
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG
NNNNGGGGGAAGANGG
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG
-----AACAAAGG---
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:KGRRSGRSRAWGGKAG
----TGGGGAAGGGCM
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:KGRRSGRSRAWGGKAG
--GGGGCCCAAGGGGG
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG
-----RACAAWGG---
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG
--GTGGGGGAGGGG--
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:KGRRSGRSRAWGGKAG
---AAAACAATGG---
 A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-KGRRSGRSRAWGGKAG-
GGAAGGAAGGAAGGAAGG
 A C G T A C G T A C T G C T G A C T A G A T C G A C T G C T A G A T C G C T A G C G T A C G T A A C T G A C T G A C G T C G T A A C T G A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G