Information for 1-ABAACCAMACRAC (Motif 4)

C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
Reverse Opposite:
A C T G C A G T G A T C A C T G C G A T C A T G A C G T C A T G C T A G C G A T A C G T T A G C A C G T
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.697
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif8.75%
Number of Background Sequences with motif99.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets50.0 +/- 34.8bp
Average Position of motif in Background51.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ABAACCAMACRAC
ATGTCACAACAACAC---
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ABAACCAMACRAC
NTTNAGAACAATTA---
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ABAACCAMACRAC
-AAACCACANN--
 C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ABAACCAMACRAC
CAAACAACAACACCT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ABAACCAMACRAC
ATATCAAAACAAAACA--
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ABAACCAMACRAC
AAAAATAACAAACGG--
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ABAACCAMACRAC
NWAACCACADNN-
 C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ABAACCAMACRAC
NNTNANAACAATTNNA-
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ABAACCAMACRAC
-AAACCACAGAN-
 C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ABAACCAMACRAC
-AAACCACAGC--
 C G T A A T C G C G T A C G T A A G T C G T A C G T C A G T A C C G T A T G A C C T A G G C T A A G T C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T