Information for 5-AARGKAGAACTAT (Motif 13)

T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C G T A C G T A G T C A C G T G T C A A G T C A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.897
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 32.1bp
Average Position of motif in Background72.1 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AARGKAGAACTAT-----
--TTTAGAACAATAAAAT
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AARGKAGAACTAT-----
--TTAAGAACAATAAATT
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AARGKAGAACTAT--
-NTTNAGAACAATTA
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AARGKAGAACTAT---
NNNNTGAGCACTGTNNG
 A C G T T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AARGKAGAACTAT
--GGGAGGACNG-
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AARGKAGAACTAT------
--TAGTGAACAATAGATTT
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AARGKAGAACTAT--
------GAACAATGG
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AARGKAGAACTAT---------
AATAAAGAACAATAGAATTTCA
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AARGKAGAACTAT------
---AATGAACAATGGAATT
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AARGKAGAACTAT----
-NNTNANAACAATTNNA
 T C G A C G T A C T A G A C T G A C G T C G T A A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A