Information for 1-AGCACCHACGCGG (Motif 1)

C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
Reverse Opposite:
A G T C A G T C A T C G A G T C A C T G A C G T C A G T A C T G C T A G C G A T A C T G A T G C A G C T
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.817
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 22.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCACCHACGCGG
YCCGCCCACGCN-
 C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCACCHACGCGG
GGACCACCCACG---
 A C G T A C G T C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCACCHACGCGG
--CRCCCACGCA-
 C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCACCHACGCGG
GACCCCCCACGAAG
 A C G T C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCACCHACGCGG
-ACGCCCACGCA-
 C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCACCHACGCGG-
AGACCCCCCACGAAGC
 A C G T A C G T C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGCACCHACGCGG--
-----CCACGTGGNN
 C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCACCHACGCGG
GCGACCACCGAA----
 A C G T A C G T A C G T C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCACCHACGCGG
GACCCCCCGCGAAG
 A C G T C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZBTB7B/MA0694.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCACCHACGCGG
GCGACCACCGAA----
 A C G T A C G T A C G T C T G A A T C G A G T C C G T A A G T C A G T C G A C T C G T A A G T C C T A G A T G C A C T G A C T G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T A C G T