Information for 7-CGGCTTTTTGCCC (Motif 7)

A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C
Reverse Opposite:
T A C G A C T G C T A G A G T C C T G A C G T A G T C A C G T A C G T A A C T G A G T C G T A C A C T G
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.897
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 23.8bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC----
--WCATTTTGKCCTCYT
 A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTTTTTGCCC
TACTTCCGCTTTTT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGCTTTTTGCCC-
CTTGGCANNNTGCCAA
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTTTTGCCC
TTGGCATGGTGCCA
 A C G T A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CGGCTTTTTGCCC---
-------CTGCCCGCA
 A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGGCTTTTTGCCC
--YCTTTGTTCC-
 A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTTTTGCCC--
TTGACCTTTTGACCTT
 A C G T A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC---
TGACCTTTTGACCTTT
 A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGGCTTTTTGCCC
CTGGCAGNCTGCCA
 A C G T A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC
-NGCTN-------
 A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T