Information for 5-AGCAATTYCC (Motif 5)

C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C
Reverse Opposite:
C A T G C A T G C T A G T G C A G T C A C G A T A C G T A C T G A G T C G C A T
p-value:1e-12
log p-value:-2.883e+01
Information Content per bp:1.448
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.73%
Number of Background Sequences with motif653.0
Percentage of Background Sequences with motif2.84%
Average Position of motif in Targets55.0 +/- 28.0bp
Average Position of motif in Background49.7 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCAATTYCC----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCAATTYCC----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCAATTYCC
NAACAAT----
 A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCAATTYCC----
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCAATTYCC----
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAATTYCC--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCAATTYCC----
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCAATTYCC----
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCAATTYCC
NNCAATTANN
 C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAATTYCC
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T C G T A T C A G T G A C T G C A G C T A C A G T A C G T G A T C G T A C G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T