Information for 5-GGAATTCCAC (Motif 5)

C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
Reverse Opposite:
A C T G G A C T A T C G T C A G C G T A C G T A A G C T A G C T T A G C A G T C
p-value:1e-12
log p-value:-2.796e+01
Information Content per bp:1.738
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif601.1
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets56.9 +/- 26.8bp
Average Position of motif in Background48.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GGAATTCCAC
NCTGGAATGC---
 A C G T A C G T A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTCCAC-
GGGAAATCCCCN
 A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGAATTCCAC
GGAAANCCCC
 C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGAATTCCAC
CCWGGAATGY---
 A C G T A C G T A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTCCAC
GGGAATTTCC-
 A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGAATTCCAC
GGGAATTTCC-
 A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAATTCCAC
GGAAATCCCC
 C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAATTCCAC--
GGGATTGCATNN
 C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGAATTCCAC
NTGGAATGTN--
 A C G T A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTCCAC-
GGGGATTCCCCC
 A C G T C T A G A T C G C T G A C T G A G C A T A C G T A G T C T A G C C T G A T G A C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C