Information for 4-AARACTAWGASTGCAR (Motif 4)

C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A T G C C G T A A T G C A C G T A G T C C G A T A C G T C G T A A C T G A C G T A G C T A C G T G A C T
p-value:1e-14
log p-value:-3.232e+01
Information Content per bp:1.723
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.3 +/- 23.9bp
Average Position of motif in Background48.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
AAAACAATGG------
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
AAAACAAAGG------
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
VRRACAAWGG------
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
GGAACAAAGR------
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
---ACAAAGGNBCCT-
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
---ACAAAG-------
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
-AANTCATGCGTGAA-
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AARACTAWGASTGCAR
-RAACAATGGN-----
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AARACTAWGASTGCAR
CTCACACAATGGCGC---
 A C G T A C G T C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AARACTAWGASTGCAR
VRAACAATGG------
 C T G A C G T A T C G A T G C A G T A C G C A T C G T A C G T A A C T G G T C A A T C G C G A T A T C G G T A C C G T A C T A G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T