Information for 5-TAGGTGGCAGCAC (Motif 2)

C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
Reverse Opposite:
A T C G G A C T A C T G A G T C A C G T A C T G A G T C A G T C G T C A A G T C A G T C C G A T G C T A
p-value:1e-26
log p-value:-6.149e+01
Information Content per bp:1.789
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif64.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.8 +/- 29.7bp
Average Position of motif in Background50.2 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGGTGGCAGCAC
CAAGATGGCGGC--
 A C G T C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAGCAC
-AGGTGTCA----
 C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAGCAC
-GGTTGGCAT---
 C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGGTGGCAGCAC--
ADGGYAGYAGCATCT
 C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGGTGGCAGCAC
CAAGATGGCGGC--
 A C G T C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAGGTGGCAGCAC
--VBTGWCAGCB-
 C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAGCAC
-ARNTGACA----
 C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TAGGTGGCAGCAC
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TAGGTGGCAGCAC-
--SCTGTCARCACC
 C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C A C G T
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAGGTGGCAGCAC
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C A G T C G T A A C T G C T A G A C G T T C A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T