Information for 6-GGAATTGCWY (Motif 6)

C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
Reverse Opposite:
T C G A G C T A A C T G A T G C G T C A T G C A C G A T A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.682
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif692.4
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets55.0 +/- 29.1bp
Average Position of motif in Background51.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGAATTGCWY--
GGGATTGCATNN
 C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAATTGCWY--
--ATTTGCATAT
 C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGAATTGCWY--
TTCATTTGCATAT
 A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGCWY
AGAGGAAGTG---
 A C G T A C G T A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGAATTGCWY
GGGGATTTCC--
 A C G T A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGAATTGCWY--
--ATTTGCATAA
 C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGCWY
NGGGGATTTCCC-
 A C G T A C G T A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGCWY
ACAGGAAGTG---
 A C G T A C G T A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGAATTGCWY
GGGAATTTCC--
 A C G T A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGAATTGCWY
GGGAATTTCC--
 A C G T A C G T C T A G T C A G G T C A G C T A A C G T A C G T A T C G A G T C C G A T A G C T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T