Information for 3-VGGGGGCGCTGTKKGC (Motif 2)

T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
Reverse Opposite:
T A C G T A G C T G C A T G C A T C G A T A G C C G T A T A C G T A G C T A C G T A G C A G T C A T G C A T G C A G T C A G C T
p-value:1e-23
log p-value:-5.391e+01
Information Content per bp:1.352
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 19.9bp
Average Position of motif in Background62.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----VGGGGGCGCTGTKKGC
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--VGGGGGCGCTGTKKGC
NAAGGGGGCGTGGCTTN-
 A C G T A C G T T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:VGGGGGCGCTGTKKGC
AGGGGGCGGGGCTG--
 T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:VGGGGGCGCTGTKKGC
-GGNGCGNCTGTTNNN
 T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------VGGGGGCGCTGTKKGC
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:VGGGGGCGCTGTKKGC
RGKGGGCGGAGC----
 T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-VGGGGGCGCTGTKKGC
TTGGGGGCGCCCCTAG-
 A C G T T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

SP8/MA0747.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:VGGGGGCGCTGTKKGC
AGTGGGCGTGGC----
 T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----VGGGGGCGCTGTKKGC
ANTGCGGGGGCGGN------
 A C G T A C G T A C G T A C G T T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:VGGGGGCGCTGTKKGC
-GGGGGCGTGGC----
 T C G A T C A G T A C G T A C G T C A G A T C G A T G C A T C G A T G C G C A T A T C G A G C T A C G T A C G T A T C G A T G C
A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T