Information for 9-MATTTGTCCTCTB (Motif 12)

G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
Reverse Opposite:
T C G A C T G A T C A G C G T A C T A G T C A G T C G A T G A C T G C A T C G A T C G A C G A T C A T G
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.414
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 21.2bp
Average Position of motif in Background61.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:MATTTGTCCTCTB
CCTTTGTTTT---
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--MATTTGTCCTCTB
WCATTTTGKCCTCYT
 A C G T A C G T G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:MATTTGTCCTCTB
----TGACCTYA-
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MATTTGTCCTCTB
CCATTGTTTT---
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MATTTGTCCTCTB
YCTTTGTTCC---
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MATTTGTCCTCTB
CCATTGTTNY---
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:MATTTGTCCTCTB
CNNTTGACCTTTG
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MATTTGTCCTCTB-
GNNATTTGTCGTAANN
 A C G T A C G T G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----MATTTGTCCTCTB
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MATTTGTCCTCTB
CCWTTGTY-----
 G T A C G C T A A G C T A G C T A C G T A C T G A G C T A G T C G A T C G C A T A G T C G A C T A G C T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T