Information for 4-SAGRKMTTKGMARWTK (Motif 9)

A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A A G C T C G A T C A G T A G T C G T A C C G T A C G T A C A T G G T C A A G C T A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.783
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.4 +/- 29.6bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
----NNTTGGCANN--
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
------TTTGAAACCG
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
-----ATTTGCATAT-
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:SAGRKMTTKGMARWTK
------TTGGCA----
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
-----CTTGGCAA---
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
----CCTTTGATGT--
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
-----NATGGAAAAN-
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
-----NTTGGCANN--
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
-ANATTTTTGCAANTN
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:SAGRKMTTKGMARWTK
-----AATGGAAAAT-
 A T C G C G T A A C T G C T G A C A G T G T A C A C G T A C G T A C T G A C T G G T C A C G T A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T