Information for 22-CCACAAAGGAAAT (Motif 25)

A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
Reverse Opposite:
C G T A A G C T G C A T G C A T A T G C G A T C A G C T G A C T A G C T A T C G A C G T C A T G T C A G
p-value:1e-12
log p-value:-2.864e+01
Information Content per bp:1.648
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets58.2 +/- 27.2bp
Average Position of motif in Background79.9 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCACAAAGGAAAT
-AACAAAGG----
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCACAAAGGAAAT
-RACAAWGG----
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCACAAAGGAAAT
---NACAGGAAAT
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAGGAAAT
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCACAAAGGAAAT
--ACAAAG-----
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAAGGAAAT
VRRACAAWGG----
 A C G T A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAAGGAAAT
AAAACAAAGG----
 A C G T A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCACAAAGGAAAT-
--AAAGRGGAAGTG
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T A C G T
A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCACAAAGGAAAT
---NACAGGAAAT
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCACAAAGGAAAT
---AACAGGAAGT
 A G T C G T A C C G T A T A G C T C G A C T G A C T G A C T A G T A C G C G T A C G T A T C G A G C A T
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T