Information for 8-ACTGCTTGATGCT (Motif 8)

T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C G T A G T C C G T A C T G A A T C G A G T C C G T A A C T G A C G T
p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.5 +/- 15.4bp
Average Position of motif in Background56.1 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCTTGATGCT-
NNANTGATTGATNTTN
 A C G T A C G T T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCTTGATGCT-
NNANTGATTGATNNNN
 A C G T A C G T T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
TTTGATTGATGN-
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
--TGATTGATGA-
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
--TGCCTGAGGCN
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
--NGCCTNAGGCN
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
--NGCCTGAGGCN
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
--TGATTTATGGC
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACTGCTTGATGCT
-ATGATKGATGRC
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACTGCTTGATGCT--
ANTGCCTGAGGCAAN
 T G C A A G T C A C G T A C T G A T G C A G C T C G A T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T