Information for 2-TCCTGTCCCTGGCAAA (Motif 4)

C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
Reverse Opposite:
G C A T A C G T C A G T A C T G A T G C A T G C C G T A C T A G C T A G A C T G T G C A A T G C C G T A C T A G C T A G G C T A
p-value:1e-14
log p-value:-3.300e+01
Information Content per bp:1.744
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.5 +/- 20.3bp
Average Position of motif in Background56.2 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
--CTGTTCCTGG----
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCCTGTCCCTGGCAAA--
--CAATCACTGGCAGAAT
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
-------CTTGGCAA-
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
-BNTGDCCTTG-----
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
---TGACCTTGAN---
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
---TGACCTTGAV---
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
--CTGACCTTTG----
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
-------NTTGGCANN
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCCTGTCCCTGGCAAA
--CGCCCCCTGACA--
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCCTGTCCCTGGCAAA
---CGCCTCAGGCA--
 C A G T A G T C A G T C G A C T A T C G A C G T A G T C A G T C A G T C C G A T A T C G A T C G G T A C G C T A T G C A C G T A
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T