Information for 4-STGTGCACACGTGTGC (Motif 12)

T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A G T A C C G T A A G T C A T C G A C G T C T A G C G A T A C T G A T G C C G T A A G T C G C T A A T G C
p-value:1e-10
log p-value:-2.455e+01
Information Content per bp:1.817
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 28.4bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:STGTGCACACGTGTGC
-----AACACGTGTT-
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----STGTGCACACGTGTGC
NTNTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:STGTGCACACGTGTGC
------GCACGTGT--
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-STGTGCACACGTGTGC
NNTTTGCACACGGCCC-
 A C G T T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:STGTGCACACGTGTGC
-------CACGTGBN-
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----STGTGCACACGTGTGC
NNGTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:7
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:STGTGCACACGTGTGC
-------CACGTG---
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:STGTGCACACGTGTGC
------TCACGTGC--
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:STGTGCACACGTGTGC---
---TGACCACGTGGTCGGG
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:STGTGCACACGTGTGC
-----GGCACGTGTC-
 T A C G C G A T C T A G A C G T A T C G A G T C C G T A A G T C C G T A A T G C A C T G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T