Information for 9-TGACCAGTGGCTCCTC (Motif 9)

C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
Reverse Opposite:
A T C G C G T A A C T G A C T G C G T A A C T G A T G C A G T C C G T A A G T C A G C T A C T G A C T G A G C T A G T C G C T A
p-value:1e-11
log p-value:-2.573e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 25.7bp
Average Position of motif in Background14.6 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGACCAGTGGCTCCTC
ATTTACAGTAGCAAAA-
 A C G T C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGACCAGTGGCTCCTC
ATGTACAGTAGCAAAG-
 A C G T C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGACCAGTGGCTCCTC
ADGGYAGYAGCATCT-
 C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGACCAGTGGCTCCTC
-GVACAGNMTGTYCTB
 C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TGACCAGTGGCTCCTC
---------GCTCCG-
 C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGACCAGTGGCTCCTC
-GRACAGWMTGTYCTB
 C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGACCAGTGGCTCCTC
AGCAACAGCCGCACC--
 A C G T C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGACCAGTGGCTCCTC
-TGCCTGCGYCMCCTT
 C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGACCAGTGGCTCCTC
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGACCAGTGGCTCCTC
AGNACANNNTGTNCTN
 C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C