Information for 7-GTGGCAGGCCATGGGA (Motif 7)

C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C A G T C C T G A A C G T A T C G A T C G A G T C A G T C A G C T A C T G A G T C A G T C G T C A A G T C
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 20.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTGGCAGGCCATGGGA--
----CAGGCCNNGGCCNN
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GTGGCAGGCCATGGGA---
---------CSTGGGAAAD
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GTGGCAGGCCATGGGA--
-------GTCATGTGACC
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTGGCAGGCCATGGGA
TTGCCAAG--------
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTGGCAGGCCATGGGA-
---ACATGCCCGGGCAT
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A A C G T
A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GTGGCAGGCCATGGGA-
-------KCCACGTGAC
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTGGCAGGCCATGGGA
-TBGCACGCAA-----
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GTGGCAGGCCATGGGA
AGGTGHCAGACA------
 A C G T A C G T C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GTGGCAGGCCATGGGA
GGGGCTYGKCTGGGA-
 C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGCAGGCCATGGGA
GGGNGGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T