Information for 1-GCTGCGGAACAGC (Motif 4)

A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A G C T A G T C A G T C A T C G A G T C C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 28.5bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCTGCGGAACAGC-
----TGGAACAGMA
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCTGCGGAACAGC
-------CACAGN
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCTGCGGAACAGC--
-------AACAGCTG
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGCGGAACAGC----
VCAKCTGGNNNCCAGMTGBN
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCGGAACAGC
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTGCGGAACAGC
--CCAGGAACAG-
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTGCGGAACAGC
--AGAGGAA----
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCTGCGGAACAGC----
----NGNGACAGCTGCN
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCGGAACAGC
CGCAGCTGCG-------
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCTGCGGAACAGC-
--TGAGTGACAGSC
 A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C