Information for 18-CACTCAWTTGRGTGYA (Motif 35)

G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
Reverse Opposite:
A C G T T C A G T G A C G T C A G A T C A G T C A G T C G T C A G T C A C G T A A C G T A T C G C G T A A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.704
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif34.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.2 +/- 23.2bp
Average Position of motif in Background53.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACTCAWTTGRGTGYA
AASCACTCAA---------
 A C G T A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACTCAWTTGRGTGYA
MRSCACTYAA---------
 A C G T A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACTCAWTTGRGTGYA
AGCCACTCAAG--------
 A C G T A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACTCAWTTGRGTGYA
AAGCACTTAA---------
 A C G T A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACTCAWTTGRGTGYA
RSCACTYRAG--------
 A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTCAWTTGRGTGYA
NSCACTYVAV--------
 A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACTCAWTTGRGTGYA
ACCACTTAA---------
 A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACTCAWTTGRGTGYA
ACCACTTAA---------
 A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CACTCAWTTGRGTGYA
AATCGCACTGCATTCCG----
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACTCAWTTGRGTGYA
CCACTTGAA--------
 A C G T G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T