Information for 16-CGCGGGGCGCCCC (Motif 33)

A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C
Reverse Opposite:
C T A G T A C G A C T G A T C G T A G C A C T G A G T C G T A C A T G C T G A C A T C G A G T C A T C G
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.764
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif145.4
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets52.1 +/- 30.8bp
Average Position of motif in Background49.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CGCGGGGCGCCCC---
NNNGGGGCGCCCCCNN
 A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

GLIS2/MA0736.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGCGGGGCGCCCC
CTTCGCGGGGGGTC--
 A C G T A C G T A C G T A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCGGGGCGCCCC
-GGGGGAATCCCC
 A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCGGGGCGCCCC
---AGCGCGCC--
 A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGGGCGCCCC---
NNNNTTGGCGCCGANNN
 A C G T A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGGGCGCCCC
TCGGTGGTCGCN--
 A C G T A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGGGCGCCCC
NCNCAGCGGGGGGTC--
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCGGGGCGCCCC-----
--ATCCCCGCCCCTAAAA
 A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCGGGGCGCCCC---
-ANCGCGCGCCCTTNN
 A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C A C G T A C G T A C G T
A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGCGGGGCGCCCC-
--TTTGGCGCCAAA
 A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C A C G T
A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A