Information for 12-GTATGCTTTTCAT (Motif 28)

A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A C G T A G T C A C G T A A C T G A G T C C G T A A C G T C T G A A T G C
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.5 +/- 29.9bp
Average Position of motif in Background54.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTATGCTTTTCAT
-TATGCAAAT---
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTATGCTTTTCAT
---TKCTGTTCCA
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTATGCTTTTCAT-
TTGTATGCAAATTAGA
 A C G T A C G T A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTATGCTTTTCAT-
TTGTATGCAAATTAGA
 A C G T A C G T A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTATGCTTTTCAT-
--BTVATTWGCATA
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTATGCTTTTCAT----
NTNTTCTTATCAGTNTN
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GTATGCTTTTCAT
-------TTTAAT
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GTATGCTTTTCAT
-CAAGCTT-----
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTATGCTTTTCAT----
NNANTCTTATCTNNNNN
 A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GTATGCTTTTCAT
AAGATATCCTT-----
 A C G T A C G T A C G T A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T