Information for 8-TGCCCTCATTAGG (Motif 22)

A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T C G T A G T C A A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G T A
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 21.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCCCTCATTAGG
TGACCTYA-----
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCATTAGG
CTGCCCGCA-----
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCCCTCATTAGG
-TNCCATATATGG
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

PH0058.1_Hoxb3/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCCCTCATTAGG----
TGAGCTAATTAGTTGGA
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCATTAGG
ATGACATCATCNN-
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCCCTCATTAGG
TGACCTARTT---
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCCCTCATTAGG
--AGCTCATTAT-
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCATTAGG---
GCAACCTCATTATNNNN
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCCCTCATTAGG
---GCTAATTAGC
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCATTAGG---
NNNACCTCATTATCNTN
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C