Information for 7-GCCGGCGGCTCCG (Motif 18)

A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
Reverse Opposite:
A G T C A C T G A C T G C T G A A C T G A G T C A G T C A T C G A G T C A G T C A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.2 +/- 17.4bp
Average Position of motif in Background66.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCCGGCGGCTCCG
ANTGCCTGAGGCAAN-
 A C G T A C G T A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.66
Offset:7
Orientation:forward strand
Alignment:GCCGGCGGCTCCG
-------GCTCCG
 A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCGGCTCCG
NGCCTGAGGCN---
 A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCGGCTCCG
TGCCTGAGGCN---
 A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCGGCTCCG
NGCCTNAGGCN---
 A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCGGCTCCG-
TGCCTGCGYCMCCTT
 A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCGGCGGCTCCG
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCCGGCGGCTCCG
------NGCTN--
 A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCCGGCGGCTCCG
ATTCCCTGAGGGGAA-
 A C G T A C G T A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GCCGGCGGCTCCG
WTGSCCTSAGGS----
 A C G T A C G T A C G T A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T