Information for 3-YSGGCTCCTCHCA (Motif 11)

A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A
Reverse Opposite:
A C G T A C T G C A T G C T A G C G T A A C T G A T C G C G T A A T C G A G T C G T A C A T G C T C G A
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.745
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif204.4
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets45.8 +/- 27.7bp
Average Position of motif in Background49.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:YSGGCTCCTCHCA--
---GCTCCGCCCMCY
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:YSGGCTCCTCHCA
--NGCTN------
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:YSGGCTCCTCHCA
---GCTCCG----
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YSGGCTCCTCHCA---
-NRGCCCCRCCCHBNN
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A A C G T A C G T A C G T
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YSGGCTCCTCHCA
--CNGTCCTCCC-
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YSGGCTCCTCHCA-
--GGCCACRCCCMK
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A A C G T
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---YSGGCTCCTCHCA-
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YSGGCTCCTCHCA
---GCCCCGCCCC
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YSGGCTCCTCHCA
---GCTTCC----
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YSGGCTCCTCHCA-
--GGCCCCGCCCCC
 A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C