Information for 4-ATTAGCAGAAAATGAR (Motif 9)

G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
Reverse Opposite:
G A T C G A C T A T G C G T C A A G C T C A G T G A C T G A C T A G T C C G A T A C T G G A T C G A C T G T C A T G C A C G A T
p-value:1e-11
log p-value:-2.706e+01
Information Content per bp:1.571
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.29%
Number of Background Sequences with motif1520.3
Percentage of Background Sequences with motif3.20%
Average Position of motif in Targets47.7 +/- 27.1bp
Average Position of motif in Background51.1 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTAGCAGAAAATGAR
ATTTGCATACAATGG-
 G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGCAGAAAATGAR
AAATTAGCATAAT-----
 A C G T A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGCAGAAAATGAR
TAATTTGCATAA------
 A C G T A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTAGCAGAAAATGAR
ATTTGCATA-------
 G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATTAGCAGAAAATGAR
TNTAATTTGCATACNA----
 A C G T A C G T A C G T A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATTAGCAGAAAATGAR
TNTAATTTGCATACNA----
 A C G T A C G T A C G T A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGCAGAAAATGAR
TAATTTGCATAA------
 A C G T A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATTAGCAGAAAATGAR
TNTAATTTGCATANNN----
 A C G T A C G T A C G T A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATTAGCAGAAAATGAR
CAATTGCAAAAATAT--
 A C G T G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATTAGCAGAAAATGAR-------
--AAANNGAAAGTGAAAGTAAAN
 G C T A A C G T C A G T C T G A C T A G T G A C C G T A T C A G C T G A C T G A G T C A C T G A C A G T T A C G C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A