Information for 7-CAGACCTTBAAHVAAA (Motif 21)

A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G T A A C G T A C G T T A G C C G T A C T G A A C T G C T A G C A G T A G T C C G A T A C T G
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.796
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.4 +/- 21.2bp
Average Position of motif in Background47.8 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGACCTTBAAHVAAA
ATGACCTTGAA-----
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGACCTTBAAHVAAA
-TGACCTTGAN-----
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGACCTTBAAHVAAA-
---TACTGGAAAAAAAA
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGACCTTBAAHVAAA------
--NNCCTGNAAAAAAAAAAAAA
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGACCTTBAAHVAAA------
--NNCCTGNAAAAAAAAAAAAA
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCTTBAAHVAAA
GCTGACCTTGAACTN--
 A C G T A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAGACCTTBAAHVAAA------
-----GTTAAAAAAAAAAATTA
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGACCTTBAAHVAAA
-TGACCTTGAV-----
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGACCTTBAAHVAAA
-TGACCTTGAT-----
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGACCTTBAAHVAAA
NTGACCTTGA------
 A G T C C G T A A C T G G T C A A G T C A G T C A G C T C G A T A C T G G T C A C G T A G A C T T C A G C G T A C G T A C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T