Information for 11-CAGTGGGAAG (Motif 18)

A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G
Reverse Opposite:
G T A C G C A T A G C T A G T C T A G C G A T C T G C A G T A C A G C T T C A G
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.810
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif248.5
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets45.6 +/- 17.8bp
Average Position of motif in Background48.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAGTGGGAAG-
-CSTGGGAAAD
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAGTGGGAAG-
-GGCGGGAARN
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGGAAG----
NNNNGGGGGAAGANGG
 A C G T A C G T A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T A C G T A C G T A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CAGTGGGAAG-
-----NGAAGC
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGTGGGAAG-
GGGCGGGAAGG
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGTGGGAAG--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGTGGGAAG-
GGGCGGGAAGG
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGGAAG
CWGGCGGGAA-
 A C G T A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

ELF5/MA0136.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGTGGGAAG--
-ACCCGGAAGTA
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T A C G T
A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGTGGGAAG-
-AVCAGGAAGT
 A G T C T C G A A C T G A C G T C T A G A T C G C T A G C T G A C G T A C A T G A C G T
A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T