Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-166 | -3.837e+02 | 0.0000 | 389.0 | 50.06% | 4943.7 | 10.53% | motif file (matrix) |
svg |
2 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-163 | -3.773e+02 | 0.0000 | 286.0 | 36.81% | 2320.4 | 4.94% | motif file (matrix) |
svg |
3 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-141 | -3.265e+02 | 0.0000 | 348.0 | 44.79% | 4528.2 | 9.64% | motif file (matrix) |
svg |
4 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-137 | -3.175e+02 | 0.0000 | 350.0 | 45.05% | 4728.5 | 10.07% | motif file (matrix) |
svg |
5 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-136 | -3.144e+02 | 0.0000 | 280.0 | 36.04% | 2813.6 | 5.99% | motif file (matrix) |
svg |
6 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-123 | -2.853e+02 | 0.0000 | 226.0 | 29.09% | 1874.4 | 3.99% | motif file (matrix) |
svg |
7 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-93 | -2.164e+02 | 0.0000 | 209.0 | 26.90% | 2217.1 | 4.72% | motif file (matrix) |
svg |
8 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-53 | -1.221e+02 | 0.0000 | 88.0 | 11.33% | 592.2 | 1.26% | motif file (matrix) |
svg |
9 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-35 | -8.117e+01 | 0.0000 | 125.0 | 16.09% | 2041.5 | 4.35% | motif file (matrix) |
svg |
10 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-26 | -6.170e+01 | 0.0000 | 66.0 | 8.49% | 746.8 | 1.59% | motif file (matrix) |
svg |
11 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-26 | -6.147e+01 | 0.0000 | 72.0 | 9.27% | 898.7 | 1.91% | motif file (matrix) |
svg |
12 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-26 | -6.058e+01 | 0.0000 | 78.0 | 10.04% | 1071.5 | 2.28% | motif file (matrix) |
svg |
13 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-25 | -5.919e+01 | 0.0000 | 70.0 | 9.01% | 882.5 | 1.88% | motif file (matrix) |
svg |
14 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-24 | -5.750e+01 | 0.0000 | 83.0 | 10.68% | 1269.7 | 2.70% | motif file (matrix) |
svg |
15 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-24 | -5.625e+01 | 0.0000 | 76.0 | 9.78% | 1093.7 | 2.33% | motif file (matrix) |
svg |
16 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-22 | -5.142e+01 | 0.0000 | 24.0 | 3.09% | 74.6 | 0.16% | motif file (matrix) |
svg |
17 |
| p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-22 | -5.138e+01 | 0.0000 | 32.0 | 4.12% | 172.9 | 0.37% | motif file (matrix) |
svg |
18 |
| p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-22 | -5.138e+01 | 0.0000 | 32.0 | 4.12% | 172.9 | 0.37% | motif file (matrix) |
svg |
19 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-20 | -4.637e+01 | 0.0000 | 45.0 | 5.79% | 457.3 | 0.97% | motif file (matrix) |
svg |
20 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.816e+01 | 0.0000 | 33.0 | 4.25% | 293.2 | 0.62% | motif file (matrix) |
svg |
21 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-11 | -2.729e+01 | 0.0000 | 27.0 | 3.47% | 288.7 | 0.61% | motif file (matrix) |
svg |
22 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.788e+01 | 0.0000 | 18.0 | 2.32% | 203.5 | 0.43% | motif file (matrix) |
svg |
23 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-7 | -1.743e+01 | 0.0000 | 76.0 | 9.78% | 2334.3 | 4.97% | motif file (matrix) |
svg |
24 |
| p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.729e+01 | 0.0000 | 7.0 | 0.90% | 18.7 | 0.04% | motif file (matrix) |
svg |
25 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-7 | -1.694e+01 | 0.0000 | 9.0 | 1.16% | 41.7 | 0.09% | motif file (matrix) |
svg |
26 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-6 | -1.442e+01 | 0.0000 | 32.0 | 4.12% | 706.4 | 1.50% | motif file (matrix) |
svg |
27 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-5 | -1.285e+01 | 0.0000 | 49.0 | 6.31% | 1438.4 | 3.06% | motif file (matrix) |
svg |
28 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.159e+01 | 0.0001 | 9.0 | 1.16% | 79.1 | 0.17% | motif file (matrix) |
svg |
29 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-4 | -1.085e+01 | 0.0002 | 25.0 | 3.22% | 577.7 | 1.23% | motif file (matrix) |
svg |
30 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-4 | -1.080e+01 | 0.0002 | 150.0 | 19.31% | 6534.2 | 13.92% | motif file (matrix) |
svg |
31 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-4 | -1.046e+01 | 0.0003 | 51.0 | 6.56% | 1666.1 | 3.55% | motif file (matrix) |
svg |
32 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-4 | -9.836e+00 | 0.0006 | 17.0 | 2.19% | 330.7 | 0.70% | motif file (matrix) |
svg |
33 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-4 | -9.654e+00 | 0.0007 | 51.0 | 6.56% | 1721.3 | 3.67% | motif file (matrix) |
svg |
34 |
| GFY(?)/Promoter/Homer | 1e-3 | -9.064e+00 | 0.0012 | 9.0 | 1.16% | 111.0 | 0.24% | motif file (matrix) |
svg |
35 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -8.973e+00 | 0.0013 | 123.0 | 15.83% | 5353.2 | 11.40% | motif file (matrix) |
svg |
36 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.871e+00 | 0.0014 | 20.0 | 2.57% | 465.3 | 0.99% | motif file (matrix) |
svg |
37 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.777e+00 | 0.0015 | 58.0 | 7.46% | 2112.5 | 4.50% | motif file (matrix) |
svg |
38 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.752e+00 | 0.0015 | 44.0 | 5.66% | 1468.4 | 3.13% | motif file (matrix) |
svg |
39 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-3 | -8.681e+00 | 0.0016 | 79.0 | 10.17% | 3139.1 | 6.69% | motif file (matrix) |
svg |
40 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -8.604e+00 | 0.0017 | 63.0 | 8.11% | 2365.6 | 5.04% | motif file (matrix) |
svg |
41 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.563e+00 | 0.0017 | 65.0 | 8.37% | 2465.7 | 5.25% | motif file (matrix) |
svg |
42 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.394e+00 | 0.0020 | 237.0 | 30.50% | 11684.5 | 24.89% | motif file (matrix) |
svg |
43 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -8.388e+00 | 0.0020 | 33.0 | 4.25% | 1008.9 | 2.15% | motif file (matrix) |
svg |
44 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-3 | -8.331e+00 | 0.0020 | 45.0 | 5.79% | 1543.8 | 3.29% | motif file (matrix) |
svg |
45 |
| Sp1(Zf)/Promoter/Homer | 1e-3 | -8.221e+00 | 0.0022 | 15.0 | 1.93% | 309.8 | 0.66% | motif file (matrix) |
svg |
46 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -8.173e+00 | 0.0022 | 66.0 | 8.49% | 2550.4 | 5.43% | motif file (matrix) |
svg |
47 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-3 | -8.082e+00 | 0.0024 | 38.0 | 4.89% | 1245.1 | 2.65% | motif file (matrix) |
svg |
48 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -8.010e+00 | 0.0025 | 72.0 | 9.27% | 2861.5 | 6.09% | motif file (matrix) |
svg |
49 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.000e+00 | 0.0025 | 18.0 | 2.32% | 423.3 | 0.90% | motif file (matrix) |
svg |
50 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.839e+00 | 0.0029 | 60.0 | 7.72% | 2290.5 | 4.88% | motif file (matrix) |
svg |
51 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.800e+00 | 0.0029 | 7.0 | 0.90% | 79.6 | 0.17% | motif file (matrix) |
svg |
52 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.702e+00 | 0.0032 | 15.0 | 1.93% | 325.8 | 0.69% | motif file (matrix) |
svg |
53 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -7.684e+00 | 0.0032 | 10.0 | 1.29% | 162.9 | 0.35% | motif file (matrix) |
svg |
54 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.651e+00 | 0.0032 | 25.0 | 3.22% | 712.8 | 1.52% | motif file (matrix) |
svg |
55 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.501e+00 | 0.0099 | 44.0 | 5.66% | 1642.9 | 3.50% | motif file (matrix) |
svg |
56 |
| OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-2 | -6.369e+00 | 0.0111 | 47.0 | 6.05% | 1798.3 | 3.83% | motif file (matrix) |
svg |
57 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -6.279e+00 | 0.0120 | 65.0 | 8.37% | 2699.6 | 5.75% | motif file (matrix) |
svg |
58 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.163e+00 | 0.0132 | 40.0 | 5.15% | 1481.8 | 3.16% | motif file (matrix) |
svg |
59 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -6.111e+00 | 0.0137 | 72.0 | 9.27% | 3076.6 | 6.55% | motif file (matrix) |
svg |
60 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-2 | -6.090e+00 | 0.0137 | 53.0 | 6.82% | 2119.0 | 4.51% | motif file (matrix) |
svg |
61 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -6.088e+00 | 0.0137 | 43.0 | 5.53% | 1631.2 | 3.47% | motif file (matrix) |
svg |
62 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.992e+00 | 0.0147 | 152.0 | 19.56% | 7388.0 | 15.73% | motif file (matrix) |
svg |
63 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.878e+00 | 0.0162 | 18.0 | 2.32% | 513.9 | 1.09% | motif file (matrix) |
svg |
64 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -5.760e+00 | 0.0179 | 13.0 | 1.67% | 320.8 | 0.68% | motif file (matrix) |
svg |
65 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.747e+00 | 0.0179 | 12.0 | 1.54% | 283.9 | 0.60% | motif file (matrix) |
svg |
66 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.631e+00 | 0.0198 | 74.0 | 9.52% | 3242.9 | 6.91% | motif file (matrix) |
svg |
67 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -5.575e+00 | 0.0206 | 16.0 | 2.06% | 446.8 | 0.95% | motif file (matrix) |
svg |
68 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.415e+00 | 0.0238 | 51.0 | 6.56% | 2092.5 | 4.46% | motif file (matrix) |
svg |
69 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.346e+00 | 0.0252 | 28.0 | 3.60% | 985.6 | 2.10% | motif file (matrix) |
svg |
70 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.063e+00 | 0.0329 | 220.0 | 28.31% | 11437.0 | 24.36% | motif file (matrix) |
svg |
71 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -4.983e+00 | 0.0351 | 57.0 | 7.34% | 2448.6 | 5.21% | motif file (matrix) |
svg |
72 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.938e+00 | 0.0362 | 79.0 | 10.17% | 3605.1 | 7.68% | motif file (matrix) |
svg |
73 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.639e+00 | 0.0482 | 21.0 | 2.70% | 717.0 | 1.53% | motif file (matrix) |
svg |