Information for 8-GCAGGCTTAGGCA (Motif 9)

C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A
Reverse Opposite:
C G A T A C T G T A G C G T A C G A C T G C T A C T G A T A C G A G T C G T A C A C G T A T C G G T A C
p-value:1e-12
log p-value:-2.849e+01
Information Content per bp:1.696
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif153.2
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets60.1 +/- 22.9bp
Average Position of motif in Background52.4 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCAGGCTTAGGCA-
ACATGCCCGGGCAT
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCAGGCTTAGGCA--
-CAGGCCNNGGCCNN
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCAGGCTTAGGCA
--AGGCCTAG---
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCAGGCTTAGGCA
--AGCCTCAGGCA
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCAGGCTTAGGCA
--AGCCTCAGGCA
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGGCTTAGGCA
--AGGCCTNG---
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCTTAGGCA----
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCTTAGGCA----
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAGGCTTAGGCA----
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAGGCTTAGGCA
--CGCCTCAGGCA
 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A