Information for 14-CTAATGAAAAGGG (Motif 19)

G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G A T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 18.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTAATGAAAAGGG
CCAATAAAAA---
 G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTAATGAAAAGGG
NCYAATAAAA----
 A C G T G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAATGAAAAGGG
CCAATAAAAA---
 G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAATGAAAAGGG
NCTAATTAANN---
 A C G T G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAATGAAAAGGG
GGTAATTAAA----
 A C G T G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTAATGAAAAGGG
AACCCAATAAAATTCG
 A C G T A C G T A C G T G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAATGAAAAGGG
GCAATAAAAA---
 G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAATGAAAAGGG
GKTAATGR------
 A C G T G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAATGAAAAGGG
CCAATAAAAC---
 G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAATGAAAAGGG
GGTAATAAAAA---
 A C G T G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T