Information for 6-AAAGCATTGCTTGTTT (Motif 16)

T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
Reverse Opposite:
G T C A C T G A G C T A G T A C C G T A C G T A C T A G G A T C G T C A G C T A C G A T A T C G A G T C G A C T A C G T A G C T
p-value:1e-9
log p-value:-2.162e+01
Information Content per bp:1.666
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 23.9bp
Average Position of motif in Background49.1 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAAGCATTGCTTGTTT
----GAATGTTTGTTT
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT
---GCAGTGATTT---
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT
-AAGCTTG--------
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT
--TGCTGTGATTT---
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT-----
-----NNNNTTTGTTTACNNT
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAAGCATTGCTTGTTT
----TATTGTTTATT-
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT--
---------ATTGTTTAN
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAAGCATTGCTTGTTT
---CCATTGTTYB---
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT-------
------NNNTTTGTTTACNTTNN
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AAAGCATTGCTTGTTT-------
------NNNTTTGTTTACNTTNN
 T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T