Information for 3-CCCACAAAGACACCAG (Motif 10)

T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
Reverse Opposite:
A G T C A G C T T A C G A C T G C G A T A C T G C A G T A G T C A G C T A C G T A C G T T A C G C G A T C T A G A T C G A T C G
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.685
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif63.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets56.9 +/- 23.1bp
Average Position of motif in Background53.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCACAAAGACACCAG
---ACAAAGGNBCCT-
 T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCCACAAAGACACCAG--
---TGACANARRCCAGRC
 T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCACAAAGACACCAG
---ACAAAG-------
 T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCACAAAGACACCAG
NWAACCACADNN-------
 A C G T A C G T A C G T T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAAAGACACCAG
AAACCACAGAN-------
 A C G T A C G T T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCCACAAAGACACCAG
VRRACAAWGG------
 T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCACAAAGACACCAG
ATGTCACAACAACAC---
 A C G T A C G T T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCACAAAGACACCAG
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCCACAAAGACACCAG
GGAACAAAGR------
 T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCCACAAAGACACCAG
AAACCACANN--------
 A C G T A C G T T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T