Information for 23-GGTTTTATGG (Motif 23)

A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C
p-value:1e-5
log p-value:-1.282e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 19.3bp
Average Position of motif in Background43.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GGTTTTATGG---
--TTTTATGGCTN
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GGTTTTATGG-
-NTTTTATTGG
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGTTTTATGG--
DGWTTTATGRCN
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GGTTTTATGG-
-NTTTTATTGG
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GGTTTTATGG-
-NTTTTATGAC
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGTTTTATGG-
--TTTTATTGC
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTATGG----
NGANTTTTATGGCTCN
 A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGTTTTATGG--
--TTTTATTRGN
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTATGG----
NNANTTTTATTGGNNN
 A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGTTTTATGG-
-TTTTTATTGG
 A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G