Information for 20-TCTGCMTTCTTGT (Motif 13)

A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A T A G C G T C A C G T A C T A G C G T A C G T A A C T G A C T G A G T C C G T A C T A G C G T A
p-value:1e-10
log p-value:-2.362e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.4 +/- 25.5bp
Average Position of motif in Background46.0 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTGCMTTCTTGT
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCTGCMTTCTTGT
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCMTTCTTGT-
CTTTGTTTACTTTTN
 A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTGCMTTCTTGT
-TTGACTTTT---
 A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCMTTCTTGT
TNNATTATGCATANNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCTGCMTTCTTGT
ATTTGCATAA----
 A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCMTTCTTGT
AATTTGCATANT---
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCTGCMTTCTTGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCMTTCTTGT
TNTAATTTGCATANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCMTTCTTGT
ATTTGCATAT----
 A C G T A C G T A G T C A C G T A C T G G T A C G T A C C G A T G C A T A G T C A C G T A C G T A C T G A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T