Information for 19-CTCCACGCTGGGA (Motif 11)

A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
Reverse Opposite:
A C G T A T G C A T G C A G T C C T G A C T A G A G T C A C T G A C G T A C T G T A C G T C G A C T A G
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.789
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.6 +/- 29.2bp
Average Position of motif in Background42.4 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTCCACGCTGGGA
---CCTGCTGAGH
 A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCCACGCTGGGA
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCCACGCTGGGA
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCCACGCTGGGA
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCCACGCTGGGA--
TCNCCTGCTGNGNNN
 A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCCACGCTGGGA
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCCACGCTGGGA
ATCCAC-------
 A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCCACGCTGGGA--
NNTCCTGCTGTGNNN
 A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCCACGCTGGGA---
-RGSMTBCTGGGAAAT
 A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCCACGCTGGGA--
TNTCCTGCTGTGNNG
 A G T C A C G T A G T C G T A C G T C A A G T C T A C G A G T C G A C T A C T G A T C G A T C G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G