Information for 1-YGCCCTCTAGTGG (Motif 1)

A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
Reverse Opposite:
G A T C G T A C C G T A A T G C G A C T C T G A A T C G C T G A C A T G A C T G A T C G G T A C T C A G
p-value:1e-105
log p-value:-2.420e+02
Information Content per bp:1.709
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif9.48%
Number of Background Sequences with motif91.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.2 +/- 23.0bp
Average Position of motif in Background49.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----YGCCCTCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.91
Offset:-6
Orientation:forward strand
Alignment:------YGCCCTCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---YGCCCTCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----YGCCCTCTAGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YGCCCTCTAGTGG
-GCCATCTGTT--
 A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YGCCCTCTAGTGG
GCCGCCATCTTG---
 A C G T A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YGCCCTCTAGTGG
GCNGCCATCTTG---
 A C G T A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YGCCCTCTAGTGG
CTGCCCGCA-----
 A C G T A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YGCCCTCTAGTGG
-ACCATCTGTT--
 A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:YGCCCTCTAGTGG--
-CCCCCCCGGGGGNN
 A G T C C A T G A T G C A G T C G T A C G A C T A T G C G A C T C T G A A T C G G C A T A C T G C T A G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G