Information for 3-CGGCAGCVACVACCCT (Motif 6)

A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
Reverse Opposite:
C G T A A C T G A C T G C T A G A G C T A C T G A C T G A G C T A C T G C T A G G T A C C G A T A C T G A G T C G T A C C T A G
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 18.7bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT-
-----GCGACCACACTG
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT-
-----GCGACCACCGAA
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZBTB7A/MA0750.1/Jaspar

Match Rank:3
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT
----GGCGACCACCGA
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
A C G T A C G T A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT-
-----GCGACCACCGAA
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT--
--------AAGACCCYYN
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT
---CAGCC--------
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CGGCAGCVACVACCCT
-----GCTGTTACCCT
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCVACVACCCT
-CGCAGCTGCG-----
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCVACVACCCT
-AGATGCTRCTRCCHT
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CGGCAGCVACVACCCT
-AGCAGCTGCTNN---
 A G T C A C T G A C T G A G T C C G T A A C T G A G T C T G A C C T G A G T A C T G A C C T G A A G T C A G T C G T A C C G A T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T