Information for 2-GCCGCCATCTTGKNKK (Motif 2)

A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
Reverse Opposite:
T G C A G T A C G A T C G T A C G T A C G T C A G C T A T A C G C G T A A C G T A C T G A C T G G T A C C A T G C T A G T G A C
p-value:1e-40
log p-value:-9.291e+01
Information Content per bp:1.598
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.20%
Number of Background Sequences with motif454.0
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets47.0 +/- 21.0bp
Average Position of motif in Background52.8 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGKNKK
GCNGCCATCTTG----
 A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGKNKK
GCCGCCATCTTG----
 A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCATCTTGKNKK
GTCCGCCATTA------
 A C G T A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGKNKK
---GCCATCTGTT---
 A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCATCTTGKNKK
CCNNACCATCTGGCCTN
 A C G T A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGKNKK
---ACCATCTGTT---
 A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCGCCATCTTGKNKK
---ACCATATGGT---
 A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATCTTGKNKK
TACGCCCCGCCACTCTG----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCATCTTGKNKK
GYCATCMATCAT-----
 A C G T A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCGCCATCTTGKNKK
-CGACCATCTGTT---
 A C T G A G T C G T A C C A T G T A G C A G T C C G T A A C G T A T G C C G A T A C G T C A T G C A T G C T A G A C T G A C G T
A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T A C G T