Information for 5-AAGAATGTGGGAAAVB (Motif 14)

C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
Reverse Opposite:
T A C G A C G T A C G T A C G T A C G T G T A C G T A C A G T C C G T A A G T C C G T A A C G T A C G T A G T C G A C T A C G T
p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.788
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.5 +/- 23.1bp
Average Position of motif in Background45.1 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB
---AAGGTGTKAA---
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATGTGGGAAAVB
NTGGAATGTG-------
 A C G T C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATGTGGGAAAVB
NTGGAATGTN-------
 A C G T C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB
----AGGTGTGAAA--
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB
---AAGGTGTGAAAAT
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB-
GAAAAGGTGTGAAAATT
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB
---AAGGTGTGAAA--
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB
---AAGGTGTGAA---
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAGAATGTGGGAAAVB
-----CSTGGGAAAD-
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAGAATGTGGGAAAVB
----AGGTGTGAAM--
 C G T A C T G A C T A G C G T A C G T A A C G T A C T G C G A T C T A G A C T G C A T G C G T A C G T A C G T A T C G A A G T C
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T