Information for 3-TGGTTGTTGTGTGTGT (Motif 9)

A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A G T A C G T C A G T A C C G T A A T G C C G T A G T C A A G T C C G T A C T G A A G T C G T A C G T C A
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 28.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGTTGTTGTGTGTGT
NNNTGTTGTTGTTNG---
 A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGTTGTTGTGTGTGT
GTNTTGTTGTGANNT-
 A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TGGTTGTTGTGTGTGT
NGGGGGGGGGTGGTTTGGGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGTTGTTGTGTGTGT
NTNTTGTTGTTTGTN-
 A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGGTTGTTGTGTGTGT------
------NNGCGTGTGTGCNGCN
 A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGGTTGTTGTGTGTGT--
--NNNNTTGTGTGCTTNN
 A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGGTTGTTGTGTGTGT----
-----GGNGCGNCTGTTNNN
 A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGTTGTGTGTGT
NNTTTTGTTTTGATNT-
 A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGTTGTTGTGTGTGT-----
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGGTTGTTGTGTGTGT
--GCTGTGGTTT----
 A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T