p-value: | 1e-13 |
log p-value: | -3.067e+01 |
Information Content per bp: | 1.914 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 2.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.0 +/- 23.2bp |
Average Position of motif in Background | 53.3 +/- 8.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCAAGGAGGCCA ---AAYTAGGTCA |
|
|
|
PB0203.1_Zfp691_2/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGCAAGGAGGCCA--- NTNNNAGGAGTCTCNTN |
|
|
|
RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCAAGGAGGCCA ---ATCAAGGTCA |
|
|
|
SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGCAAGGAGGCCA AAGGCAAGTGT---- |
|
|
|
NR4A2/MA0160.1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GGCAAGGAGGCCA- ------AAGGTCAC |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGCAAGGAGGCCA -----TRAGGTCA |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGCAAGGAGGCCA -----AGRGGTCA |
|
|
|
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGCAAGGAGGCCA--- NGAGGTCANNGAGTTCANNN |
|
|
|
Nr2f6(var.2)/MA0728.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGCAAGGAGGCCA GAGGTCAAAAGGTCA |
|
|
|
NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGCAAGGAGGCCA TGGCACCATGCCAA |
|
|
|