Information for 3-TTCCCAGACA (Motif 3)

G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
Reverse Opposite:
G C A T T C A G C A G T A T G C G A C T A C T G C T A G T A C G T G C A C G T A
p-value:1e-15
log p-value:-3.589e+01
Information Content per bp:1.684
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.57%
Number of Background Sequences with motif1036.1
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets45.1 +/- 30.1bp
Average Position of motif in Background49.6 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGACA
TGCCCAGNHW
 G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TTCCCAGACA-
---CCAGACAG
 G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGACA-----
CAAATCCAGACATCACA
 A C G T A C G T G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:TTCCCAGACA---
---CCAGACRSVB
 G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTCCCAGACA------
-TCCCAGMCRAGCCCC
 G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGACA
HTTTCCCASG--
 A C G T A C G T G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGACA
ATGCCAGACN
 G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGACA
ATTTCCAAGAA-
 A C G T A C G T G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGACA
TTTCCCAGAAN
 A C G T G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGACA
TTTCCTGGAAA
 A C G T G C A T A C G T A T G C A G T C G T A C C T G A T A C G G T C A A G T C C G T A
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A