Information for 5-GCGGCTCCCTGAG (Motif 5)

A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
Reverse Opposite:
A G T C A C G T T G A C C G T A A C T G A C T G A C T G C G T A A C T G A T G C A G T C C T A G A G T C
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 27.7bp
Average Position of motif in Background23.4 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCGGCTCCCTGAG
---GCTCCG----
 A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGGCTCCCTGAG
GCCCCGCCCC---
 A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGCTCCCTGAG
GCCMCRCCCH---
 A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGCTCCCTGAG
GCCCCACCCA---
 A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCTCCCTGAG
GGCCACRCCCMK--
 A C G T A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGCTCCCTGAG
CNGTCCTCCC----
 A C G T A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGCTCCCTGAG
NRGCCCCRCCCHBNN
 A C G T A C G T A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCGGCTCCCTGAG-----
------SCCTSAGGSCAW
 A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCGGCTCCCTGAG
GGCCACACCCA---
 A C G T A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCTCCCTGAG
NAGCCCCGCCCCCN-
 A C G T A C G T A C T G A G T C T A C G A T C G A G T C A C G T A G T C A G T C A G T C A C G T A C T G G T C A A C T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T